Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938182.1_cds_XP_016483165.1_74309
CDS Infomation

[gene=LOC107803885] [db_xref=GeneID:107803885] [protein=heat shock cognate 70 kDa protein 2] [protein_id=XP_016483165.1] [location=complement(join(20634..22366,23427..23640))] [gbkey=CDS]
Sequence

ATGGCCGGAAAAGGAGAAGGACCGGCGATCGGAATCGATCTCGGCACTACATACTCATGC
GTCGGCGTGTGGCAACACGACCGTGTTGAAATCATTGCCAATGATCAAGGTAACAGAACG
ACGCCGTCCTACGTTGGTTTCACTGATTCTGAGCGTCTCATTGGTGATGCTGCCAAAAAT
CAAGTCGCTATGAACCCTACCAATACTGTCTTCGATGCTAAAAGGTTGATCGGTAGGAGA
TTTAGTGATGCCTCTGTGCAGAGTGACATGAAGTTGTGGCCATTCAAGGTCATTCCTGGT
GCTGGTGATAAACCCATGATTGTTGTCAACTACAAGGGTGAGGAGAAACAGTTTGCTGCC
GAGGAGATCTCATCTATGGTGCTCATAAAGATGAAAGAGATTGCTGAAGCGTTCCTTGGC
ACAACTGTTAAGAATGCTGTGGTTACTGTTCCAGCCTACTTCAATGACTCTCAGCGTCAG
GCCACCAAGGATGCTGGTGTTATTTCAGGCCTGAATGTGATGCGTATTATTAATGAACCT
ACAGCAGCTGCCATTGCTTATGGTCTTGATAAGAAGGCAACAAGTGTTGGTGAGAAGAAT
GTGCTTATCTTTGATCTTGGTGGTGGTACATTTGATGTCTCTCTTCTCACAATTGAGGAA
GGTATCTTTGAGGTGAAAGCTACCGCTGGAGACACCCATCTTGGAGGTGAGGACTTCGAC
AATAGGTTGGTTAACCATTTCGTTCAGGAATTCAAGAGGAAGAGCAAAAAGGATATCACC
GGTAATCCTAGGGCACTCAGAAGGTTGAGAACTGCATGTGAGAGGGCAAAGAGAACTCTT
TCCTCCACTGCTCAGACCACCATTGAAATTGACTCTCTGTACGAGGGTATTGACTTCTAT
TCCACCATCACACGCGCTAGATTTGAAGAGCTTAACATGGATCTGTTTAGAAAATGTATG
GAACCAGTTGAAAAGTGTTTGAGGGACGCTAAGATGGACAAGAGCACAGTTCATGATGTT
GTTCTTGTTGGTGGCTCCACTAGAATCCCAAAGGTGCAACAGCTTTTACAGGACTTTTTC
AATGGGAAGGAGCTCTGCAAGAGCATTAACCCTGATGAGGCTGTTGCTTATGGTGCAGCA
GTGCAAGCTGCAATTTTGAGTGGTGAGGGTAATGAGAAGGTGCAGGACCTTTTGTTGTTG
GATGTTACCCCTCTTTCCCTTGGTCTGGAAACTGCTGGTGGTGTCATGACTGTGTTGATT
CCCAGAAACACCACTATCCCAACCAAGAAAGAGCAGGTCTTCTCAACCTACTCTGACAAC
CAGCCTGGTGTGTTGATTCAAGTCTATGAAGGTGAGAGAACGAGGACCAGGGACAACAAC
TTGCTTGGCAAATTTGAGCTCTCTGGCATCCCTCCTGCCCCTAGGGGAGTTCCTCAAATC
ACAGTGTGCTTTGACATTGACGCCAATGGTATCTTGAATGTCTCTGCTGAGGACAAGACC
ACAGGGCAGAAGAACAAGATTACCATCACCAATGACAAGGGCAGACTCTCAAAGGAGGAG
ATTGAGAAGATGGTTCAGGAAGCAGAGAAGTACAAATCTGAGGATGAAGAGCACAAGAAG
AAGGTCGAGGCGAAGAATGCTTTGGAGAACTATTCATACAATATGAGGAACACTGTGAAA
GATGAGAAGATTGCATCCAAACTGTCCGCTGAAGACAAGAAGAAGATTGAGGATGCCATT
GAGGAAGCCATCCAATGGCTTGATGGCAACCAGCTTGCCGAGGCTGATGAATTTGAAGAC
AAAATGAAGGAACTAGAGGGCCTCTGCAACCCAATCATTGCAAAAATGTACCAGGGCGCA
GGTGGAGACATGGGTGGTGCCATGGATGATGAGGGTCCTGCTCCTAGTGGTGGTGGTGCT
GGTCCTAAGATTGAGGAGGTGGACTAA

Peptide Sequence

PEP ID

XP_016483165.1
PEP Infomation

PREDICTED: heat shock cognate 70 kDa protein 2 [Nicotiana tabacum]
Sequence

MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVGFTDSERLIGDAAKN
QVAMNPTNTVFDAKRLIGRRFSDASVQSDMKLWPFKVIPGAGDKPMIVVNYKGEEKQFAA
EEISSMVLIKMKEIAEAFLGTTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP
TAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRLVNHFVQEFKRKSKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
STITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKSEDEEHKK
KVEAKNALENYSYNMRNTVKDEKIASKLSAEDKKKIEDAIEEAIQWLDGNQLAEADEFED
KMKELEGLCNPIIAKMYQGAGGDMGGAMDDEGPAPSGGGAGPKIEEVD

Transcript Sequence

Gene sequence data has not been registered.